20.9.7.1 White Matter Fiber Tractography MRI

Chapter Contents (Back)
Fiber Tractography. Tractography. Cortex. MRI.

Friman, O., Farneback, G., Westin, C.F.,
A Bayesian Approach for Stochastic White Matter Tractography,
MedImg(25), No. 8, August 2006, pp. 965-978.
IEEE DOI 0608
BibRef

Peled, S.,
New Perspectives on the Sources of White Matter DTI Signal,
MedImg(26), No. 11, November 2007, pp. 1448-1455.
IEEE DOI 0709
BibRef

O'Donnell, L.J., Westin, C.F.[Carl-Fredrik],
Automatic Tractography Segmentation Using a High-Dimensional White Matter Atlas,
MedImg(26), No. 11, November 2007, pp. 1562-1575.
IEEE DOI 0709
BibRef

Kang, N., Zhang, J., Carlson, E.S., Gembris, D.,
White Matter Fiber Tractography Via Anisotropic Diffusion Simulation in the Human Brain,
MedImg(24), No. 9, September 2005, pp. 1127-1137.
IEEE DOI 0509
BibRef

Xu, D., Hao, X., Bansal, R., Plessen, K.J., Peterson, B.S.,
Seamless Warping of Diffusion Tensor Fields,
MedImg(27), No. 3, March 2008, pp. 285-299.
IEEE DOI 0803
MRI BibRef

Ramirez-Manzanares, A., Rivera, M., Vemuri, B.C., Carney, P., Mareci, T.,
Diffusion Basis Functions Decomposition for Estimating White Matter Intravoxel Fiber Geometry,
MedImg(26), No. 8, August 2007, pp. 1091-1102.
IEEE DOI 0709
BibRef

Jonasson, L., Bresson, X., Thiran, J.P., Wedeen, V.J., Hagmann, P.,
Representing Diffusion MRI in 5-D Simplifies Regularization and Segmentation of White Matter Tracts,
MedImg(26), No. 11, November 2007, pp. 1547-1554.
IEEE DOI 0709
BibRef

Clayden, J.D., Storkey, A.J., Bastin, M.E.,
A Probabilistic Model-Based Approach to Consistent White Matter Tract Segmentation,
MedImg(26), No. 11, November 2007, pp. 1555-1561.
IEEE DOI 0709
BibRef

Clarke, R.A., Scifo, P., Rizzo, G., Dell'Acqua, F., Scotti, G., Fazio, F.,
Noise Correction on Rician Distributed Data for Fibre Orientation Estimators,
MedImg(27), No. 9, September 2008, pp. 1242-1251.
IEEE DOI 0809
white fiber in the brain. BibRef

Xu, Q.[Qing], Anderson, A.W.[Adam W.], Gore, J.C.[John C.], Ding, Z.H.[Zhao-Hua],
Unified Bundling and Registration of Brain White Matter Fibers,
MedImg(28), No. 9, September 2009, pp. 1399-1411.
IEEE DOI 0909
BibRef
Earlier:
Diffusion Tensor Image Smoothing Using Efficient and Effective Anisotropic Filtering,
MMBIA07(1-6).
IEEE DOI 0710
BibRef

Zvitia, O., Mayer, A., Shadmi, R., Miron, S., Greenspan, H.K.,
Co-registration of White Matter Tractographies by Adaptive-Mean-Shift and Gaussian Mixture Modeling,
MedImg(29), No. 1, January 2010, pp. 132-145.
IEEE DOI 1001
BibRef

Mayer, A., Zimmerman-Moreno, G., Shadmi, R., Batikoff, A., Greenspan, H.,
A Supervised Framework for the Registration and Segmentation of White Matter Fiber Tracts,
MedImg(30), No. 1, January 2011, pp. 131-145.
IEEE DOI 1101
BibRef

Faria, A.V.[Andreia V.], Oishi, K.[Kenichi], Mori, S.[Susumu],
Study of white matter anatomy and 3D tract reconstruction by diffusion tensor imaging,
IJIST(20), No. 1, March 2010, pp. 51-56.
DOI Link 1003
BibRef

Yang, F.[Faguo], Shan, Z.Y.[Zuyao Y.], Kruggel, F.[Frithjof],
White matter lesion segmentation based on feature joint occurrence probability and [chi]2 random field theory from magnetic resonance (MR) images,
PRL(31), No. 9, 1 July 2010, pp. 781-790.
Elsevier DOI 1004
White matter lesions; Joint probability; [chi]2 Random field theory BibRef

Woliny, G., Tittgemeyer, M., Kruggel, F.,
Segmentation of Vector Fields by Critical Point Analysis: Application to Brain Deformation,
ICPR02(I: 524-527).
IEEE DOI 0211
BibRef

Mittelhaeusser, G., Kruggel, F.,
Fast Segmentation of Brain Magnetic Resonance Tomograms,
CVRMed95(XX-YY) BibRef 9500

Lohmann, G., Kruggel, F.,
Extracting Lines of Maximal Depth from MRI Images of the Human Brain,
ICPR96(III: 518-522).
IEEE DOI 9608
(Max-Planck-Inst. of Cognitive Neuroscience, D) BibRef

Malcolm, J.G., Shenton, M.E., Rathi, Y.,
Filtered Multitensor Tractography,
MedImg(29), No. 9, September 2010, pp. 1664-1675.
IEEE DOI 1003
Fiber tracking. BibRef

Rudra, A.K.[Ashish K.], Sen, M.[Mainak], Chowdhury, A.S.[Ananda S.], Elnakib, A.[Ahmed], El-Baz, A.[Ayman],
3D Graph cut with new edge weights for cerebral white matter segmentation,
PRL(32), No. 7, 1 May 2011, pp. 941-947.
Elsevier DOI 1101
BibRef
Earlier: A3, A1, A2, A4, A5:
Cerebral white matter segmentation from MRI using probabilistic graph cuts and geometric shape priors,
ICIP10(3649-3652).
IEEE DOI 1009
Graph cut; Edge weights; Subgraph; Shape prior; Cerebral white matter segmentation BibRef

R÷ttger, D.[Diana], Seib, V.[Viktor], MŘller, S.[Stefan],
Distance-based tractography in high angular resolution diffusion MRI,
VC(27), No. 6-8, June 2011, pp. 729-738.
WWW Link. 1107
BibRef

Darki, F.[Fahimeh], Oghabian, M.A.[Mohammad Ali], Ahmadian, A.[Alireza], Zadeh, H.S.[Hamid Soltanian], Zarei, M.[Mojtaba],
Fractional anisotropy-weighted front evolution algorithm for white matter tractography based on diffusion tensor imaging data,
IJIST(21), No. 4, December 2011, pp. 307-314.
DOI Link 1112
BibRef

Yoldemir, B., Acar, B., Firat, Z., Kilickesmez, O.,
SMT: A Reliability Based Interactive DTI Tractography Algorithm,
MedImg(31), No. 10, October 2012, pp. 1929-1940.
IEEE DOI 1210
BibRef

Sotiropoulos, S.N., Jbabdi, S., Andersson, J.L., Woolrich, M.W., Ugurbil, K., Behrens, T.E.J.,
RubiX: Combining Spatial Resolutions for Bayesian Inference of Crossing Fibers in Diffusion MRI,
MedImg(32), No. 6, 2013, pp. 969-982.
IEEE DOI 1307
Solid modeling; Brain; tractography BibRef

Lee, J.[Jungsoo], Kim, D.S.[Dae-Shik],
Divide et impera: Acceleration of DTI tractography using multi-GPU parallel processing,
IJIST(23), No. 3, 2013, pp. 256-264.
DOI Link 1309
tractography, GPU parallel processing BibRef

Momayyez Siahkal, P.[Parya], Siddiqi, K.[Kaleem],
3D Stochastic Completion Fields for Mapping Connectivity in Diffusion MRI,
PAMI(35), No. 4, April 2013, pp. 983-995.
IEEE DOI 1303
BibRef

Kumar, K.[Kuldeep], Desrosiers, C.[Christian], Siddiqi, K.[Kaleem],
Brain Fiber Clustering Using Non-negative Kernelized Matching Pursuit,
MLMI15(144-152).
Springer DOI 1511
BibRef

Momayyez, P.[Parya], Siddiqi, K.[Kaleem],
3D stochastic completion fields for fiber tractography,
MMBIA09(178-185).
IEEE DOI 0906
BibRef

Zhan, T.M.[Tian-Ming], Zhan, Y.[Yongzhao], Liu, Z.[Zhe], Xiao, L.[Liang], Wei, Z.H.[Zhi-Hui],
Automatic method for white matter lesion segmentation based on T1-fluid-attenuated inversion recovery images,
IET-CV(9), No. 4, 2015, pp. 447-455.
DOI Link 1509
Gaussian distribution BibRef

Sudre, C.H., Cardoso, M.J., Bouvy, W.H., Biessels, G.J., Barnes, J., Ourselin, S.,
Bayesian Model Selection for Pathological Neuroimaging Data Applied to White Matter Lesion Segmentation,
MedImg(34), No. 10, October 2015, pp. 2079-2102.
IEEE DOI 1511
Bayes methods BibRef

Daducci, A., Palu, A.D.[A. Dal], Lemkaddem, A., Thiran, J.P.,
COMMIT: Convex Optimization Modeling for Microstructure Informed Tractography,
MedImg(34), No. 1, January 2015, pp. 246-257.
IEEE DOI 1502
biodiffusion BibRef

Galinsky, V.L., Frank, L.R.,
Simultaneous Multi-Scale Diffusion Estimation and Tractography Guided by Entropy Spectrum Pathways,
MedImg(34), No. 5, May 2015, pp. 1177-1193.
IEEE DOI 1505
Couplings BibRef

Gori, P., Colliot, O., Marrakchi-Kacem, L., Worbe, Y., de Vico Fallani, F., Chavez, M., Poupon, C., Hartmann, A., Ayache, N., Durrleman, S.,
Parsimonious Approximation of Streamline Trajectories in White Matter Fiber Bundles,
MedImg(35), No. 12, December 2016, pp. 2609-2619.
IEEE DOI 1612
Computational modeling BibRef

Fuster, A.[Andrea], Haije, T.D.[Tom Dela], Tristßn-Vega, A.[Antonio], Plantinga, B.[Birgit], Westin, C.F.[Carl-Fredrik], Florack, L.[Luc],
Adjugate Diffusion Tensors for Geodesic Tractography in White Matter,
JMIV(54), No. 1, January 2016, pp. 1-14.
Springer DOI 1601
BibRef

Gori, P., Colliot, O., Kacem, L.M., Worbe, Y., Routier, A., Poupon, C., Hartmann, A., Ayache, N., Durrleman, S.,
Double Diffeomorphism: Combining Morphometry and Structural Connectivity Analysis,
MedImg(37), No. 9, September 2018, pp. 2033-2043.
IEEE DOI 1809
Strain, White matter, Shape, Grey matter, Surface morphology, Integrated circuit modeling, Shape, neural circuits BibRef

Schucht, P., Lee, H.R., Mezouar, H.M., Hewer, E., Raabe, A., Murek, M., Zubak, I., Goldberg, J., K÷vari, E., Pierangelo, A., Novikova, T.,
Visualization of White Matter Fiber Tracts of Brain Tissue Sections With Wide-Field Imaging Mueller Polarimetry,
MedImg(39), No. 12, December 2020, pp. 4376-4382.
IEEE DOI 2012
Tumors, Brain, White matter, Optical imaging, Optical reflection, Optical variables measurement, Optical fibers, Brain imaging, white matter fiber tracts visualization BibRef

Arkesteijn, G.A.M., Poot, D.H.J., Ikram, M.A., Niessen, W.J., van Vliet, L.J., Vernooij, M.W., Vos, F.M.,
Orientation Prior and Consistent Model Selection Increase Sensitivity of Tract-Based Spatial Statistics in Crossing-Fiber Regions,
MedImg(39), No. 2, February 2020, pp. 308-319.
IEEE DOI 2002
Sociology, Statistics, Imaging, Sensitivity, Complexity theory, DW-MRI, TBSS, atlas orientation prior BibRef


Rafael-Patino, J., Barakovic, M., Girard, G., Daducci, A., Thiran, J.,
Learning Global Brain Microstructure Maps Using Trainable Sparse Encoders,
ICIP19(2926-2930)
IEEE DOI 1910
Diffusion MRI, Neural Networks, Sparse Encoding, Convex Optimization, Microstructure Imaging, Tractography BibRef

Olivetti, E.[Emanuele], Gori, P.[Pietro], Astolfi, P.[Pietro], Bertˇ, G.[Giulia], Avesani, P.[Paolo],
Nonlinear Alignment of Whole Tractograms with the Linear Assignment Problem,
WBIR20(3-11).
Springer DOI 2006
BibRef

Wang, W.J.[Wen-Juan], Liu, J.[Jin], Wang, T.F.[Teng-Fei], Hu, Z.T.[Zong-Tao], Xia, L.[Li], Wang, H.Z.[Hong-Zhi], Yang, L.Z.[Li-Zhuang], Wong, S.T.C.[Stephen T.C.], Zhang, X.C.[Xiao-Chu], Li, H.[Hai],
Non-rigid Registration of White Matter Tractography Using Coherent Point Drift Algorithm,
MBIA19(3-11).
Springer DOI 1912
BibRef

Wegmayr, V.[Viktor], Giuliari, G.[Giacomo], Buhmann, J.M.[Joachim M.],
Entrack: A Data-Driven Maximum-Entropy Approach to Fiber Tractography,
GCPR19(232-244).
Springer DOI 1911
BibRef

Jha, R.R.[Ranjeet Ranjan], Patil, S.[Shreyas], Nigam, A.[Aditya], Bhavsar, A.[Arnav],
FS2Net: Fiber Structural Similarity Network (FS2Net) for Rotation Invariant Brain Tractography Segmentation Using Stacked LSTM Based Siamese Network,
CAIP19(II:459-469).
Springer DOI 1909
BibRef

Dayan, M., Katsageorgiou, V.-., Dodero, L., Murino, V., Sona, D.,
Unsupervised Detection of White Matter Fiber Bundles with Stochastic Neural Networks,
ICIP18(3513-3517)
IEEE DOI 1809
Neural networks, Data models, Magnetic resonance imaging, Clustering algorithms, White matter, Measurement, Training, restricted boltzmann machine BibRef

Gupta, V.[Vikash], Prasad, G.[Gautam], Thompson, P.M.[Paul M.],
A Volumetric Conformal Mapping Approach for Clustering White Matter Fibers in the Brain,
SeSAME16(3-14).
Springer DOI 1703
BibRef

Cauteruccio, F.[Francesco], Stamile, C.[Claudio], Terracina, G.[Giorgio], Ursino, D.[Domenico], Sappey-Marinier, D.[Dominique],
Improving QuickBundles to Extract Anatomically Coherent White Matter Fiber-Bundles,
ICIAR16(633-641).
Springer DOI 1608
BibRef

Stamile, C.[Claudio], Cotton, F.[Franšois], Maes, F.[Frederik], Sappey-Marinier, D.[Dominique], van Huffel, S.[Sabine],
White Matter Fiber-Bundle Analysis Using Non-negative Tensor Factorization,
ICIAR16(650-657).
Springer DOI 1608
BibRef

Auria, A., Romascano, D., Canales-Rodriguen, E., Wiaux, Y., Dirby, T.B., Alexander, D., Thiran, J.P., Daducci, A.,
Accelerated microstructure imaging via convex optimisation for regions with multiple fibres (AMICOx),
ICIP15(1673-1676)
IEEE DOI 1512
convex optimisation; diffusion MRI; microstructure imaging BibRef

Stamile, C., Kocevar, G., Cotton, F., Hannoun, S., Durand-Dubief, F., Frindel, C., Rousseau, D., Sappey-Marinier, D.,
A longitudinal model for variations detection in white matter fiber-bundles,
WSSIP15(57-60)
IEEE DOI 1603
biodiffusion BibRef

Boubchir, L.[Larbi], Rousseau, F.[Francois],
Unsupervised white matter fiber tracts clustering methodology with application on brain MRI data,
ICIP14(1872-1876)
IEEE DOI 1502
Clustering algorithms BibRef

Kadoury, S.[Samuel], Erus, G.[Guray], Davatzikos, C.[Christos],
Nonlinear Discriminant Graph Embeddings for Detecting White Matter Lesions in FLAIR MRI,
MLMI12(94-102).
Springer DOI 1211
BibRef

Jin, Y.[Yan], Shi, Y.G.[Yong-Gang], Zhan, L.[Liang], Li, J.[Junning], de Zubicaray, G.I.[Greig I.], McMahon, K.L.[Katie L.], Martin, N.G.[Nicholas G.], Wright, M.J.[Margaret J.], Thompson, P.M.[Paul M.],
Automatic Population HARDI White Matter Tract Clustering by Label Fusion of Multiple Tract Atlases,
MBIA12(147-156).
Springer DOI 1210
BibRef

Booth, B.G.[Brian G.], Hamarneh, G.[Ghassan],
Multi-region competitive tractography via graph-based random walks,
MMBIA12(73-78).
IEEE DOI 1203
BibRef

Zhang, T.[Tuo], Guo, L.[Lei], Chen, H.[Hanbo], Hu, X.[Xintao], Li, K.[Kaiming], Liu, T.M.[Tian-Ming],
Constructing Fiber Atlases for Functional ROIs via fMRI-Guided DTI Image Registration,
MBIA12(167-174).
Springer DOI 1210
BibRef

Senthilkumaran, N., Rajesh, R., Thilagavathy, C.,
Hybrid method for white matter separation in brain images using granular rough sets and fuzzy thresholding,
ICIP10(3037-3040).
IEEE DOI 1009
BibRef

Bauer, M.H.A.[Miriam Helen Anna], Egger, J.[Jan], O'Donnell, T.[Tom], Barbieri, S.[Sebastiano], Klein, J.[Jan], Freisleben, B.[Bernd], Hahn, H.K.[Horst-Karl], Nimsky, C.[Christopher],
A Fast and Robust Graph-Based Approach for Boundary Estimation of Fiber Bundles Relying on Fractional Anisotropy Maps,
ICPR10(4016-4019).
IEEE DOI 1008
BibRef

Gomez, S.R.[Steven R.], Jianu, R.[Radu], Laidlaw, D.H.[David H.],
A Fiducial-Based Tangible User Interface for White Matter Tractography,
ISVC10(II: 373-381).
Springer DOI 1011
BibRef

Guevara, P.[Pamela], Duclap, D.[Delphine], Poupon, C.[Cyril], Marrakchi-Kacem, L.[Linda], Houenou, J.[Josselin], Leboyer, M.[Marion], Mangin, J.F.[Jean-Franšois],
Segmentation of Short Association Bundles in Massive Tractography Datasets Using a Multi-subject Bundle Atlas,
CIARP11(701-708).
Springer DOI 1111
BibRef

Neji, R.[Radhouene], Paragios, N.[Nikos], Fleury, G.[Gilles], Thiran, J.P.[Jean-Philippe], Langs, G.[Georg],
Classification of tensors and fiber tracts using Mercer-kernels encoding soft probabilistic spatial and diffusion information,
CVPR09(2168-2175).
IEEE DOI 0906
BibRef

Qazi, A.A.[Arish A.], Kindlmann, G.[Gordon], O'Donnell, L.[Lauren], Peled, S.[Sharon], Radmanesh, A.[Alireza], Whalen, S.[Stephen], Golby, A.J.[Alexandra J.], Westin, C.F.[Carl-Fredrik],
Two-tensor streamline tractography through white matter intra-voxel fiber crossings: Assessed by fMRI,
MMBIA08(1-8).
IEEE DOI 0806
BibRef

Tsai, A.[Andy], Westin, C.F.[Carl-Fredrik], Hero, A.O.[Alfred O.], Willsky, A.S.[Alan S.],
Fiber Tract Clustering on Manifolds With Dual Rooted-Graphs,
CVPR07(1-6).
IEEE DOI 0706
BibRef

Neji, R.[RadhouŔne], Azzabou, N.[Noura], Paragios, N.[Nikos], Fleury, G.[Gilles],
A Convex Semi-definite Positive Framework for DTI Estimation and Regularization,
ISVC07(I: 220-229).
Springer DOI 0711
BibRef

El-Baz, A., Casanova, M., Gimel'farb, G.L., Mott, M., Switala, A., Vanbogaert, E., McCracken, R.,
Dyslexia diagnostics by 3D texture analysis of cerebral white matter gyrifications,
ICPR08(1-4).
IEEE DOI 0812
BibRef

Zimmerman-Moreno, G.[Gali], Mayer, A.[Arnaldo], Greenspan, H.[Hayit],
Classification trees for fast segmentation of DTI brain fiber tracts,
MMBIA08(1-7).
IEEE DOI 0806
BibRef

Maddah, M.[Mahnaz], Zollei, L.[Lilla], Grimson, W.E.L.[W. Eric L.], Wells, W.M.[William M.],
Modeling of anatomical information in clustering of white matter fiber trajectories using Dirichlet distribution,
MMBIA08(1-7).
IEEE DOI 0806
BibRef

Axelsson, M.[Maria],
Estimating 3D fibre orientation in volume images,
ICPR08(1-4).
IEEE DOI 0812
BibRef

Masutani, Y.[Yoshitaka], Aoki, S.[Shigeki], Abe, O.[Osamu], Yoshida, M.[Mariko], Yamada, H.[Haruyasu], Mori, H.[Harushi], Ino, K.[Kenji], Ohtomo, K.[Kuni],
Building Statistical Atlas of White Matter Fiber Tract Based on Vector/Tensor Field Reconstruction in Diffusion Tensor MRI,
ISVC05(84-91).
Springer DOI 0512
BibRef

Gong, G.L.[Gao-Lang], Jiang, T.Z.[Tian-Zi], Xie, S.[Sheng], Lin, F.C.[Fu-Chun],
Parcellating the Intra-splenium Based on the Traced Fiber from Tractography,
CVBIA05(544-550).
Springer DOI 0601
BibRef

Chapter on Medical Applications, CAT, MRI, Ultrasound, Heart Models, Brain Models continues in
Brain, Cortex, Cerebral Arteries, Cerebral Aneurysm, Cerebrovascular .


Last update:Mar 3, 2021 at 15:01:44