21.4.4.9 Gel Electrophoresis Images

Chapter Contents (Back)
Gel Electrophoresis.

Haralick, R.M., Tyson, J.,
Computer Analysis of Two-Dimensional Gels by a General Image Processing System,
Electrophoresis(7), 1986, pp. 107-113. BibRef 8600

Ip, H.H.S., Potter, D.J.,
Comparison of 2-D Gel Electrophoresis Images,
PRL(5), 1987, pp. 81-86. BibRef 8700

Skolnick, M.M.[Michael M.],
Application of Morphological Transformations to the Analysis of Two-Dimensional Electrophoretic Gels of Biological Materials,
CVGIP(35), No. 3, 1987, pp. 306-332.
Elsevier DOI BibRef 8700
Earlier:
Automatic Comparison of 2-D Electrophoretic Gels,
CVPR85(48-54). (RPI) Application, Medical. White blood cell proteins. Generate a simple graph of spots, and use graph matching. BibRef

Wang, D.Y.[Da-You], Keller, J.M.[James M.], Carson, C.A.[C. Andrew],
Pulsed-Field Gel Electrophoresis Pattern Recognition of Bacterial DNA: A Systemic Approach,
PAA(4), No. 4 2001, pp. 244-255.
Springer DOI 0202
BibRef

Markovich, G., Skolnick, M.M., Core, M.,
A new methodology for isolating and diagnosing inconsistencies in image matching, as applied to the analysis of 2-D electrophoretic gels,
WACV92(197-204).
IEEE Abstract. 0403
BibRef

Adiga, P.S.U.[P.S. Umesh], Flint, J.[Jonathan],
An Efficient Tool for Genetic Experiments: Agarose Gel Image Analysis,
PR(36No. 10, October 2003, pp. 2453-2461.
Elsevier DOI 0308
BibRef

Savelonas, M.A.[Michalis A.], Mylona, E.A.[Eleftheria A.], Maroulis, D.[Dimitris],
Unsupervised 2D gel electrophoresis image segmentation based on active contours,
PR(45), No. 2, February 2012, pp. 720-731.
Elsevier DOI 1110
Segmentation; Active contours; 2D-gel electrophoresis images BibRef

Mylona, E.A.[Eleftheria A.], Savelonas, M.A.[Michalis A.], Maroulis, D.[Dimitris],
Automated Adjustment of Region-Based Active Contour Parameters Using Local Image Geometry,
Cyber(44), No. 12, December 2014, pp. 2757-2770.
IEEE DOI 1402
BibRef
Earlier:
Entropy-based spatially-varying adjustment of active contour parameters,
ICIP12(2565-2568).
IEEE DOI 1302
eigenvalues and eigenfunctions BibRef

Mylona, E.A., Savelonas, M.A., Maroulis, D., Aivaliotis, M.,
2D-GE image segmentation based on level-sets,
ICIP11(2141-2144).
IEEE DOI 1201
BibRef

Zacharia, E.[Eleni], Kostopoulou, E.[Eirini], Maroulis, D.[Dimitris], Kossida, S.[Sophia],
A Spot Segmentation Approach for 2D Gel Electrophoresis Images Based on 2D Histograms,
ICPR10(2540-2543).
IEEE DOI 1008
BibRef

Mylona, E.A.[Eleftheria A.],
Image Analysis and Processing with Applications in Proteomics and Medicine,
ELCVIA(14), No. 3, 2015, pp. xx-yy.
DOI Link 1601
Thesis summary. BibRef

Wei, X.Y.[Xiao-Yong], Yang, Z.Q.[Zhen-Qun], Zhang, X.L.[Xu-Lu], Liao, G.[Ga], Sheng, A.L.[Ai-Lin], Zhou, S.K.[S. Kevin], Wu, Y.K.[Yong-Kang], Du, L.[Liang],
Deep Collocative Learning for Immunofixation Electrophoresis Image Analysis,
MedImg(40), No. 7, July 2021, pp. 1898-1910.
IEEE DOI 2107
Tensors, Visualization, Computational modeling, Proteins, Analytical models, Logic gates, Backtracking, coached attention gates BibRef

An, X.M.[Xu-Ming], Li, P.[Pengchang], Zhang, C.[Chen],
Deep Cascade-Learning Model via Recurrent Attention for Immunofixation Electrophoresis Image Analysis,
MedImg(42), No. 12, December 2023, pp. 3847-3859.
IEEE DOI 2312
diagnosis of M-protein. BibRef


Kostopoulou, E.[Eirini], Zacharia, E.[Eleni], Maroulis, D.[Dimitris], Vlahou, A.[Antonia],
2D-GE image analysis focusing on elimination of spurious spots,
ICPR12(1627-1630).
WWW Link. 1302
2D Gel Electrophoresis. BibRef

Jonak, K.[Katarzyna], Jedrasiak, K.[Karol], Polanski, A.[Andrzej], Puszynski, K.[Krzysztof],
Application of Image Processing Algorithms in Proteomics: Automatic Analysis of 2-D Gel Electrophoresis Images from Western Blot Assay,
ICCVG12(433-440).
Springer DOI 1210
BibRef

Maramis, C.[Christos], Delopoulos, A.[Anastasios],
Efficient Quantitative Information Extraction from PCR-RFLP Gel Electrophoresis Images,
ICPR10(2560-2563).
IEEE DOI 1008
BibRef

Maramis, C.[Christos], Minga, E.[Evangelia], Delopoulos, A.[Anastasios],
An Application for Semi-automatic HPV Typing of PCR-RFLP Images,
ICIAR10(II: 173-184).
Springer DOI 1006
BibRef

Caridade, C.M.R., Marcal, A.R.S., Mendonça, T., Pessoa, A.M., Pereira, S.,
Automatic Information Extraction from Gel Electrophoresis Images Using GEIAS,
ICIAR10(II: 185-194).
Springer DOI 1006
BibRef

Tsakanikas, P., Manolakos, I.,
Effective Denoising of 2D Gel Proteomics Images using Contourlets,
ICIP07(VI: 269-272).
IEEE DOI 0709
BibRef

Ijaz, U.Z., Chaudhary, S.U., Don, M.S., Kim, K.Y.,
Computational strategies for protein quantitation in 2D electrophoresis gel image processor for Matlab,
FBIT07(129-134).
IEEE DOI Code, Image Analysis. BibRef 0700

Srinark, T., Kambhamettu, C.,
1265: An Approach for Spot Matching in 2-D Electrophoresis Gels,
ICIP06(1165-1168).
IEEE DOI 0610
BibRef

Rogers, M., Graham, J., Tonge, R.P.,
Automatic Construction of Statistical Shape Models for Protein Spot Analysis in Electrophoresis Gels,
BMVC03(xx-yy).
HTML Version. 0409
BibRef

Mo, X.R.[Xiao-Ran], Wilson, R.G.[Roland G.],
A Multiscale Decomposition Approach to Gel Image Interpretation,
SCIA03(430-437).
Springer DOI 0310
BibRef

Wilson, R.,
Modelling of 2d gel electrophoresis images for proteomics databases,
ICPR02(I: 767-770).
IEEE DOI 0211
BibRef

Pedersen, L., Ersbøll, B.K.,
Protein Spot Correspondence in Two-dimensional Electrophoresis Gels,
SCIA01(P-W3A). 0206
BibRef

Takahashi, K.[Katsutoshi], Watanabe, Y.[Yasuo],
An Analysis System for Two-Dimensional Gel Electrophoresis Images of Genomic DNA,
ICPR98(Vol I: 368-371).
IEEE DOI 9808
BibRef

Watanabe, Y., Takahashi, K., and Nakazawa, M.,
Automated Detection and Matching of Spots in Autoradiogram Images of Two-Dimensional Electrophoresis for High-Speed Genome Scanning,
ICIP97(III: 496-499).
IEEE DOI BibRef 9700

Bettens, E.[Eva], Schueunders, P., Sijbers, J., van Dyck, D., Moens, L.,
Automatic Segmentation and Modelling of Two-Dimensional Electrophoresis Gels,
ICIP96(II: 665-668).
IEEE DOI BibRef 9600

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