@inproceedings{bb261100,
AUTHOR = "Ijaz, U.Z. and Chaudhary, S.U. and Don, M.S. and Kim, K.Y.",
TITLE = "Computational strategies for protein quantitation in
2D electrophoresis gel image processor for Matlab",
BOOKTITLE = FBIT07,
YEAR = "2007",
PAGES = "129-134",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851gel1.html#TT255925"}
@inproceedings{bb261101,
AUTHOR = "Srinark, T. and Kambhamettu, C.",
TITLE = "1265: An Approach for Spot Matching in 2-D Electrophoresis Gels",
BOOKTITLE = ICIP06,
YEAR = "2006",
PAGES = "1165-1168",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851gel1.html#TT255926"}
@inproceedings{bb261102,
AUTHOR = "Rogers, M. and Graham, J. and Tonge, R.P.",
TITLE = "Automatic Construction of Statistical Shape Models for Protein Spot
Analysis in Electrophoresis Gels",
BOOKTITLE = BMVC03,
YEAR = "2003",
PAGES = "xx-yy",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851gel1.html#TT255927"}
@inproceedings{bb261103,
AUTHOR = "Mo, X.R. and Wilson, R.G.",
TITLE = "A Multiscale Decomposition Approach to Gel Image Interpretation",
BOOKTITLE = SCIA03,
YEAR = "2003",
PAGES = "430-437",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851gel1.html#TT255928"}
@inproceedings{bb261104,
AUTHOR = "Wilson, R.",
TITLE = "Modelling of 2d gel electrophoresis images for proteomics databases",
BOOKTITLE = ICPR02,
YEAR = "2002",
PAGES = "I: 767-770",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851gel1.html#TT255929"}
@inproceedings{bb261105,
AUTHOR = "Pedersen, L. and Ersboll, B.K.",
TITLE = "Protein Spot Correspondence in Two-dimensional Electrophoresis Gels",
BOOKTITLE = SCIA01,
YEAR = "2001",
PAGES = "P-W3A",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851gel1.html#TT255930"}
@inproceedings{bb261106,
AUTHOR = "Takahashi, K. and Watanabe, Y.",
TITLE = "An Analysis System for Two-Dimensional Gel Electrophoresis Images
of Genomic DNA",
BOOKTITLE = ICPR98,
YEAR = "1998",
PAGES = "Vol I: 368-371",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851gel1.html#TT255931"}
@inproceedings{bb261107,
AUTHOR = "Watanabe, Y. and Takahashi, K. and Nakazawa, M.",
TITLE = "Automated Detection and Matching of Spots in Autoradiogram Images of
Two-Dimensional Electrophoresis for High-Speed Genome Scanning",
BOOKTITLE = ICIP97,
YEAR = "1997",
PAGES = "III: 496-499",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851gel1.html#TT255932"}
@inproceedings{bb261108,
AUTHOR = "Bettens, E. and Schueunders, P. and Sijbers, J. and van Dyck, D. and Moens, L.",
TITLE = "Automatic Segmentation and Modelling of Two-Dimensional
Electrophoresis Gels",
BOOKTITLE = ICIP96,
YEAR = "1996",
PAGES = "II: 665-668",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851gel1.html#TT255933"}
@inproceedings{bb261109,
AUTHOR = "Glaser, D.A. and Ward, C.R.",
TITLE = "Computer Identification of Bacteria by Colony Morphology",
BOOKTITLE = FPR72,
YEAR = "1972",
PAGES = "139-162",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255934"}
@article{bb261110,
AUTHOR = "Trattner, S. and Greenspan, H. and Tepper, G. and Abboud, S.",
TITLE = "Automatic Identification of Bacterial Types Using Statistical Imaging
Methods",
JOURNAL = MedImg,
VOLUME = "23",
YEAR = "2004",
NUMBER = "7",
MONTH = "July",
PAGES = "807-820",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255935"}
@inproceedings{bb261111,
AUTHOR = "Trattner, S. and Feigin, M. and Greenspan, H. and Sochen, N.A.",
TITLE = "Can Born Approximate the Unborn? A New Validity Criterion for the Born
Approximation in Microscopic Imaging",
BOOKTITLE = MMBIA07,
YEAR = "2007",
PAGES = "1-8",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255936"}
@article{bb261112,
AUTHOR = "Volkovich, Z. and Kirzhner, V. and Barzily, Z. and Hosid, S. and Korenblat, K.",
TITLE = "A linguistic approach to classification of bacterial genomes",
JOURNAL = PR,
VOLUME = "43",
YEAR = "2010",
NUMBER = "3",
MONTH = "March",
PAGES = "1083-1093",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255937"}
@article{bb261113,
AUTHOR = "Ferrari, A. and Lombardi, S. and Signoroni, A.",
TITLE = "Bacterial colony counting with Convolutional Neural Networks in
Digital Microbiology Imaging",
JOURNAL = PR,
VOLUME = "61",
YEAR = "2017",
NUMBER = "1",
PAGES = "629-640",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255938"}
@article{bb261114,
AUTHOR = "Signoroni, A. and Savardi, M. and Pezzoni, M. and Guerrini, F. and Arrigoni, S. and Turra, G.",
TITLE = "Combining the use of CNN classification and strength-driven compression
for the robust identification of bacterial species on hyperspectral
culture plate images",
JOURNAL = IET-CV,
VOLUME = "12",
YEAR = "2018",
NUMBER = "7",
MONTH = "October",
PAGES = "941-949",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255939"}
@article{bb261115,
AUTHOR = "Gibson, T. and Bedrossian, M. and Serabyn, E. and Lindensmith, C. and Nadeau, J.L.",
TITLE = "Using the Gouy phase anomaly to localize and track bacteria in
digital holographic microscopy 4D images",
JOURNAL = JOSA-A,
VOLUME = "38",
YEAR = "2021",
NUMBER = "2",
MONTH = "February",
PAGES = "A11-A18",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255940"}
@inproceedings{bb261116,
AUTHOR = "Solorio Fernandez, S. and Carrasco Ochoa, J.A. and Martinez Trinidad, J.F.",
TITLE = "Unsupervised Feature Selection Methodology for Analysis of Bacterial
Taxonomy Profiles",
BOOKTITLE = MCPR21,
YEAR = "2021",
PAGES = "47-56",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255941"}
@inproceedings{bb261117,
AUTHOR = "Wang, J. and Batabyal, T. and Zhang, M. and Zhang, J. and Aziz, A. and Gahlmann, A. and Acton, S.T.",
TITLE = "Lcuts: Linear Clustering of Bacteria Using Recursive Graph Cuts",
BOOKTITLE = ICIP19,
YEAR = "2019",
PAGES = "1575-1579",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255942"}
@inproceedings{bb261118,
AUTHOR = "Balomenos, A.D. and Stefanou, V. and Manolakos, E.S.",
TITLE = "Bacterial Image Analysis and Single-Cell Analytics to Decipher the
Behavior of Large Microbial Communities",
BOOKTITLE = ICIP18,
YEAR = "2018",
PAGES = "2436-2440",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255943"}
@inproceedings{bb261119,
AUTHOR = "Turra, G. and Arrigoni, S. and Signoroni, A.",
TITLE = "CNN-Based Identification of Hyperspectral Bacterial Signatures for
Digital Microbiology",
BOOKTITLE = CIAP17,
YEAR = "2017",
PAGES = "II:500-510",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255944"}
@inproceedings{bb261120,
AUTHOR = "Andreini, P. and Bonechi, S. and Bianchini, M. and Mecocci, A. and di Massa, V.",
TITLE = "Automatic Image Analysis and Classification for Urinary Bacteria
Infection Screening",
BOOKTITLE = CIAP15,
YEAR = "2015",
PAGES = "I:635-646",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255945"}
@inproceedings{bb261121,
AUTHOR = "Hosseini, M. and Sowmya, A. and Vallotton, P. and Bednarz, T.",
TITLE = "High Precision Localization of Bacterium and Scientific Visualization",
BOOKTITLE = AccBio13,
YEAR = "2013",
PAGES = "210-213",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255946"}
@inproceedings{bb261122,
AUTHOR = "Zhou, Z. and Zhao, Y.L. and Fan, D.K.",
TITLE = "Research on cyanobacteria blooms monitoring ability of HJ-1 CCD",
BOOKTITLE = IASP11,
YEAR = "2011",
PAGES = "546-549",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255947"}
@inproceedings{bb261123,
AUTHOR = "Vallotton, P. and Sun, C.M. and Wang, D.D. and Turnbull, L. and Whitchurch, C. and Ranganathan, P.",
TITLE = "Segmentation and tracking individual Pseudomonas aeruginosa bacteria in
dense populations of motile cells",
BOOKTITLE = IVCNZ09,
YEAR = "2009",
PAGES = "221-225",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255948"}
@inproceedings{bb261124,
AUTHOR = "Bhattacharya, U. and Liebscher, V. and Datta, A. and Parui, S.K. and Rodenacker, K. and Chaudhuri, B.B.",
TITLE = "Shape Extraction of Volumetric Images of Filamentous Bacteria Using
Topology Adaptive Self Organization",
BOOKTITLE = ICPR00,
YEAR = "2000",
PAGES = "Vol II: 291-294",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255949"}
@inproceedings{bb261125,
AUTHOR = "Roa, F. and Bravo, A. and Valery, A.",
TITLE = "Automated characterization of bacteria in confocal microscope images",
BOOKTITLE = MMBIA08,
YEAR = "2008",
PAGES = "1-8",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255950"}
@inproceedings{bb261126,
AUTHOR = "Churkin, A. and Barash, D.",
TITLE = "Pattern Recognition Method to Detect Vulnerable Spots in an RNA
Sequence for Bacterial Resistance to the Antibiotic Spectinomycin",
BOOKTITLE = "BioInfo05",
YEAR = "2005",
PAGES = "III: 139-139",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255951"}
@inproceedings{bb261127,
AUTHOR = "Chaudhuri, B. and Adiga, P.U.",
TITLE = "Analysis of Volumetric Images of Filamentous Bacteria in
Industrial Sludge",
BOOKTITLE = ICPR98,
YEAR = "1998",
PAGES = "Vol II: 1735-1737",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255952"}
@inproceedings{bb261128,
AUTHOR = "Kreitz, S. and Hess, A. and Anderson, T.H.",
TITLE = "Direct enumeration and size classification of soil bacteria using
confocal laser scanning microscopy and image analysis",
BOOKTITLE = ICIP95,
YEAR = "1995",
PAGES = "I: 454-457",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851ba2.html#TT255953"}
@article{bb261129,
AUTHOR = "Thompson, R.",
TITLE = "A measure of shared information in classes of patterns",
JOURNAL = PR,
VOLUME = "12",
YEAR = "1980",
NUMBER = "6",
PAGES = "369-379",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255954"}
@article{bb261130,
AUTHOR = "Guigo, R. and Smith, T.F.",
TITLE = "Inferring correlation between database queries: analysis of protein
sequence patterns",
JOURNAL = PAMI,
VOLUME = "15",
YEAR = "1993",
NUMBER = "10",
MONTH = "October",
PAGES = "1030-1041",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255955"}
@article{bb261131,
AUTHOR = "Leherte, L. and Glasgow, J. and Baxter, K. and Steeg, E. and Fortier, S.",
TITLE = "Analysis of Three-Dimensional Protein Images",
JOURNAL = JAIR,
VOLUME = "7",
YEAR = "1997",
PAGES = "125-159",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255956"}
@article{bb261132,
AUTHOR = "Zaki, M.J. and Jin, S. and Bystroff, C.",
TITLE = "Mining residue contacts in proteins using local structure predictions",
JOURNAL = SMC-B,
VOLUME = "33",
YEAR = "2003",
NUMBER = "5",
MONTH = "October",
PAGES = "789-801",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255957"}
@article{bb261133,
AUTHOR = "Yang, Z.R.",
TITLE = "Orthogonal kernel Machine for the prediction of functional sites in
proteins",
JOURNAL = SMC-B,
VOLUME = "35",
YEAR = "2005",
NUMBER = "1",
MONTH = "February",
PAGES = "100-106",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255958"}
@article{bb261134,
AUTHOR = "Zhang, G.Z. and Huang, D.S. and Quan, Z.H.",
TITLE = "Combining a binary input encoding scheme with RBFNN for globulin
protein inter-residue contact map prediction",
JOURNAL = PRL,
VOLUME = "26",
YEAR = "2005",
NUMBER = "10",
MONTH = "July",
PAGES = "1543-1553",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255959"}
@article{bb261135,
AUTHOR = "Zhang, G.Z. and Huang, D.S. and Zhu, Y.P. and Li, Y.X.",
TITLE = "Improving protein secondary structure prediction by using the residue
conformational classes",
JOURNAL = PRL,
VOLUME = "26",
YEAR = "2005",
NUMBER = "15",
MONTH = "November",
PAGES = "2346-2352",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255960"}
@article{bb261136,
AUTHOR = "Zhao, T. and Velliste, M. and Boland, M.V. and Murphy, R.F.",
TITLE = "Object Type Recognition for Automated Analysis of Protein Subcellular
Location",
JOURNAL = IP,
VOLUME = "14",
YEAR = "2005",
NUMBER = "9",
MONTH = "September",
PAGES = "1351-1359",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255961"}
@article{bb261137,
AUTHOR = "Zacharakis, G. and Ripoll, J. and Weissleder, R. and Ntziachristos, V.",
TITLE = "Fluorescent protein tomography scanner for small animal imaging",
JOURNAL = MedImg,
VOLUME = "24",
YEAR = "2005",
NUMBER = "7",
MONTH = "July",
PAGES = "878-885",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255962"}
@article{bb261138,
AUTHOR = "Lozano, M.A. and Escolano, F.",
TITLE = "Protein classification by matching and clustering surface graphs",
JOURNAL = PR,
VOLUME = "39",
YEAR = "2006",
NUMBER = "4",
MONTH = "April",
PAGES = "539-551",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255963"}
@article{bb261139,
AUTHOR = "Kim, J.K. and Raghava, G.P.S. and Bang, S.Y. and Choi, S.J.",
TITLE = "Prediction of subcellular localization of proteins using pairwise
sequence alignment and support vector machine",
JOURNAL = PRL,
VOLUME = "27",
YEAR = "2006",
NUMBER = "9",
MONTH = "July",
PAGES = "996-1001",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255964"}
@article{bb261140,
AUTHOR = "Kim, J.K. and Bang, S.Y. and Choi, S.J.",
TITLE = "Sequence-driven features for prediction of subcellular localization of
proteins",
JOURNAL = PR,
VOLUME = "39",
YEAR = "2006",
NUMBER = "12",
MONTH = "December",
PAGES = "2301-2311",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255965"}
@article{bb261141,
AUTHOR = "Vijaya, P.A. and Murty, M.N. and Subramanian, D.K.",
TITLE = "Efficient bottom-up hybrid hierarchical clustering techniques for
protein sequence classification",
JOURNAL = PR,
VOLUME = "39",
YEAR = "2006",
NUMBER = "12",
MONTH = "December",
PAGES = "2344-2355",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255966"}
@inproceedings{bb261142,
AUTHOR = "Vijaya, P.A. and Murty, M.N. and Subramanian, D.K.",
TITLE = "An efficient technique for protein sequence clustering and
classification",
BOOKTITLE = ICPR04,
YEAR = "2004",
PAGES = "II: 447-450",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255967"}
@article{bb261143,
AUTHOR = "Khoja, R. and Marolia, M. and Acharya, T. and Chakrabarti, C.",
TITLE = "A coprocessor architecture for fast protein structure prediction",
JOURNAL = PR,
VOLUME = "39",
YEAR = "2006",
NUMBER = "12",
MONTH = "December",
PAGES = "2494-2505",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255968"}
@article{bb261144,
AUTHOR = "Plotz, T. and Fink, G.A.",
TITLE = "Pattern Recognition methods for advanced stochastic protein sequence
analysis using HMMs",
JOURNAL = PR,
VOLUME = "39",
YEAR = "2006",
NUMBER = "12",
MONTH = "December",
PAGES = "2267-2280",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255969"}
@inproceedings{bb261145,
AUTHOR = "Plotz, T. and Fink, G.A.",
TITLE = "Feature Extraction for Improved Profile HMM Based Biological Sequence
Analysis",
BOOKTITLE = ICPR04,
YEAR = "2004",
PAGES = "II: 315-318",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255970"}
@article{bb261146,
AUTHOR = "Bergkvist, A. and Damaschke, P.",
TITLE = "Fast algorithms for finding disjoint subsequences with extremal
densities",
JOURNAL = PR,
VOLUME = "39",
YEAR = "2006",
NUMBER = "12",
MONTH = "December",
PAGES = "2281-2292",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255971"}
@article{bb261147,
AUTHOR = "Huang, D.S. and Zhao, X.M. and Huang, G.B. and Cheung, Y.M.",
TITLE = "Classifying protein sequences using hydropathy blocks",
JOURNAL = PR,
VOLUME = "39",
YEAR = "2006",
NUMBER = "12",
MONTH = "December",
PAGES = "2293-2300",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255972"}
@article{bb261148,
AUTHOR = "Kurgan, L.A. and Homaeian, L.",
TITLE = "Prediction of structural classes for protein sequences and
domains--Impact of prediction algorithms, sequence representation and
homology, and test procedures on accuracy",
JOURNAL = PR,
VOLUME = "39",
YEAR = "2006",
NUMBER = "12",
MONTH = "December",
PAGES = "2323-2343",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255973"}
@article{bb261149,
AUTHOR = "Chen, C.Y. and Chung, W.C. and Su, C.T.",
TITLE = "Exploiting homogeneity in protein sequence clusters for construction of
protein family hierarchies",
JOURNAL = PR,
VOLUME = "39",
YEAR = "2006",
NUMBER = "12",
MONTH = "December",
PAGES = "2356-2369",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255974"}
@article{bb261150,
AUTHOR = "Baldacci, L. and Golfarelli, M. and Lumini, A. and Rizzi, S.",
TITLE = "Clustering techniques for protein surfaces",
JOURNAL = PR,
VOLUME = "39",
YEAR = "2006",
NUMBER = "12",
MONTH = "December",
PAGES = "2370-2382",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255975"}
@inproceedings{bb261151,
AUTHOR = "Baldacci, L. and Golfarelli, M. and Lumini, A. and Rizzi, S.",
TITLE = "A Template-Matching Approach for Protein Surface Clustering",
BOOKTITLE = ICPR06,
YEAR = "2006",
PAGES = "III: 340-343",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255976"}
@article{bb261152,
AUTHOR = "Mundra, P. and Kumar, M. and Kumar, K.K. and Jayaraman, V.K. and Kulkarni, B.D.",
TITLE = "Using pseudo amino acid composition to predict protein subnuclear
localization: Approached with PSSM",
JOURNAL = PRL,
VOLUME = "28",
YEAR = "2007",
NUMBER = "13",
MONTH = "October",
PAGES = "1610-1615",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255977"}
@inproceedings{bb261153,
AUTHOR = "Karnik, S. and Mitra, J. and Singh, A. and Kulkarni, B.D. and Sundarajan, V. and Jayaraman, V.K.",
TITLE = "Identification of N-Glycosylation Sites with Sequence and Structural
Features Employing Random Forests",
BOOKTITLE = PReMI09,
YEAR = "2009",
PAGES = "146-151",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255978"}
@inproceedings{bb261154,
AUTHOR = "Karnik, S. and Prasad, A. and Diwevedi, A. and Sundararajan, V. and Jayaraman, V.K.",
TITLE = "Identification of Defensins Employing Recurrence Quantification
Analysis and Random Forest Classifiers",
BOOKTITLE = PReMI09,
YEAR = "2009",
PAGES = "152-157",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255979"}
@inproceedings{bb261155,
AUTHOR = "McLaren, G. and Ellis, R. and Douglass, J.W. and Riding, T.J. and Ring, J.E.",
TITLE = "Automated detection of objects in a biological sample",
BOOKTITLE = US_Patent,
YEAR = "2007",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255980"}
@article{bb261156,
AUTHOR = "Li, Y.L. and de Ridder, D. and Duin, R.P.W. and Reinders, M.J.T.",
TITLE = "Integration of prior knowledge of measurement noise in kernel density
classification",
JOURNAL = PR,
VOLUME = "41",
YEAR = "2008",
NUMBER = "1",
MONTH = "January",
PAGES = "320-330",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255981"}
@article{bb261157,
AUTHOR = "Tsai, C.Y. and Chiu, C.C.",
TITLE = "An efficient conserved region detection method for multiple protein
sequences using principal component analysis and wavelet transform",
JOURNAL = PRL,
VOLUME = "29",
YEAR = "2008",
NUMBER = "5",
MONTH = "April",
PAGES = "616-628",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255982"}
@article{bb261158,
AUTHOR = "Savvides, A. and Promponas, V.J. and Fokianos, K.",
TITLE = "Clustering of biological time series by cepstral coefficients based
distances",
JOURNAL = PR,
VOLUME = "41",
YEAR = "2008",
NUMBER = "7",
MONTH = "July",
PAGES = "2398-2412",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255983"}
@article{bb261159,
AUTHOR = "Ding, Y.S. and Zhang, T.L.",
TITLE = "Using Chou's pseudo amino acid composition to predict subcellular
localization of apoptosis proteins: An approach with immune genetic
algorithm-based ensemble classifier",
JOURNAL = PRL,
VOLUME = "29",
YEAR = "2008",
NUMBER = "13",
MONTH = "October",
PAGES = "1887-1892",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255984"}
@article{bb261160,
AUTHOR = "Buske, F.A. and Maetschke, S. and Boden, M.",
TITLE = "It's about time:
Signal recognition in staged models of protein translocation",
JOURNAL = PR,
VOLUME = "42",
YEAR = "2009",
NUMBER = "4",
MONTH = "April",
PAGES = "567-574",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255985"}
@article{bb261161,
AUTHOR = "von Wegner, F. and Schurmann, S. and Fink, R.H.A. and Vogel, M. and Friedrich, O.",
TITLE = "Motor Protein Function in Skeletal Muscle:
A Multiple Scale Approach to Contractility",
JOURNAL = MedImg,
VOLUME = "28",
YEAR = "2009",
NUMBER = "10",
MONTH = "October",
PAGES = "1632-1642",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255986"}
@article{bb261162,
AUTHOR = "Barash, E. and Dinn, S. and Sevinsky, C. and Ginty, F.",
TITLE = "Multiplexed Analysis of Proteins in Tissue Using Multispectral
Fluorescence Imaging",
JOURNAL = MedImg,
VOLUME = "29",
YEAR = "2010",
NUMBER = "8",
MONTH = "August",
PAGES = "1457-1462",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255987"}
@article{bb261163,
AUTHOR = "Sabarinathan, R. and Banerjee, N. and Balakrishnan, N. and Sekar, K.",
TITLE = "An algorithm to find distant repeats in a pair of protein sequences",
JOURNAL = PRL,
VOLUME = "31",
YEAR = "2010",
NUMBER = "14",
MONTH = "October",
PAGES = "2161-2169",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255988"}
@article{bb261164,
AUTHOR = "Diniz, M.C. and Pacheco, A.C.L. and Girao, K.T. and Araujo, F.F. and Walter, C.A. and Oliveira, D.M.",
TITLE = "The tetratricopeptide repeats (TPR)-like superfamily of proteins in
Leishmania spp., as revealed by multi-relational data mining",
JOURNAL = PRL,
VOLUME = "31",
YEAR = "2010",
NUMBER = "14",
MONTH = "October",
PAGES = "2178-2189",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255989"}
@article{bb261165,
AUTHOR = "Wang, H.Y. and Zheng, H. and Browne, F. and Glass, D.H. and Azuaje, F.",
TITLE = "Integration of Gene Ontology-based similarities for supporting analysis
of protein-protein interaction networks",
JOURNAL = PRL,
VOLUME = "31",
YEAR = "2010",
NUMBER = "14",
MONTH = "October",
PAGES = "2073-2082",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255990"}
@article{bb261166,
AUTHOR = "Jancura, P. and Marchiori, E.",
TITLE = "Dividing protein interaction networks for modular network comparative
analysis",
JOURNAL = PRL,
VOLUME = "31",
YEAR = "2010",
NUMBER = "14",
MONTH = "October",
PAGES = "2083-2096",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255991"}
@article{bb261167,
AUTHOR = "Anand, A. and Pugalenthi, G. and Fogel, G.B. and Suganthan, P.N.",
TITLE = "Identification and analysis of transcription factor family-specific
features derived from DNA and protein information",
JOURNAL = PRL,
VOLUME = "31",
YEAR = "2010",
NUMBER = "14",
MONTH = "October",
PAGES = "2097-2102",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255992"}
@article{bb261168,
AUTHOR = "Horst, J.A. and Samudrala, R.",
TITLE = "A protein sequence meta-functional signature for calcium binding
residue prediction",
JOURNAL = PRL,
VOLUME = "31",
YEAR = "2010",
NUMBER = "14",
MONTH = "October",
PAGES = "2103-2112",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255993"}
@article{bb261169,
AUTHOR = "Jain, B.J. and Obermayer, K.",
TITLE = "Graph quantization",
JOURNAL = CVIU,
VOLUME = "115",
YEAR = "2011",
NUMBER = "7",
MONTH = "July",
PAGES = "946-961",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255994"}
@inproceedings{bb261170,
AUTHOR = "Jain, B.J. and Obermayer, K.",
TITLE = "Generalized Learning Graph Quantization",
BOOKTITLE = GbRPR11,
YEAR = "2011",
PAGES = "122-131",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255995"}
@inproceedings{bb261171,
AUTHOR = "Jain, B.J. and Obermayer, K.",
TITLE = "Maximum Likelihood for Gaussians on Graphs",
BOOKTITLE = GbRPR11,
YEAR = "2011",
PAGES = "62-71",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255996"}
@inproceedings{bb261172,
AUTHOR = "Jain, B.J. and Obermayer, K.",
TITLE = "Consistent Estimator of Median and Mean Graph",
BOOKTITLE = ICPR10,
YEAR = "2010",
PAGES = "1032-1035",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255997"}
@inproceedings{bb261173,
AUTHOR = "Jain, B.J. and Obermayer, K.",
TITLE = "Algorithms for the Sample Mean of Graphs",
BOOKTITLE = CAIP09,
YEAR = "2009",
PAGES = "351-359",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255998"}
@inproceedings{bb261174,
AUTHOR = "Jain, B.",
TITLE = "Margin Perceptrons for Graphs",
BOOKTITLE = ICPR14,
YEAR = "2014",
PAGES = "3851-3856",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT255999"}
@inproceedings{bb261175,
AUTHOR = "Jain, B.",
TITLE = "Flip-Flop Sublinear Models for Graphs",
BOOKTITLE = SSSPR14,
YEAR = "2014",
PAGES = "93-102",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256000"}
@inproceedings{bb261176,
AUTHOR = "Jain, B.",
TITLE = "Mixtures of Radial Densities for Clustering Graphs",
BOOKTITLE = CAIP13,
YEAR = "2013",
PAGES = "110-119",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256001"}
@article{bb261177,
AUTHOR = "Pietrosemoli, N. and Lopez, D. and Segura Cabrera, A. and Pazos, F.",
TITLE = "Computational Prediction of Important Regions in Protein Sequences",
JOURNAL = SPMag,
VOLUME = "29",
YEAR = "2012",
NUMBER = "3",
PAGES = "143-147",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256002"}
@article{bb261178,
AUTHOR = "Lei, Y.K. and You, Z.H. and Dong, T. and Jiang, Y.X. and Yang, J.A.",
TITLE = "Increasing reliability of protein interactome by fast manifold
embedding",
JOURNAL = PRL,
VOLUME = "34",
YEAR = "2013",
NUMBER = "4",
MONTH = "March",
PAGES = "372-379",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256003"}
@article{bb261179,
AUTHOR = "Cantoni, V. and Ferone, A. and Ozbudak, O. and Petrosino, A.",
TITLE = "Protein motifs retrieval by SS terns occurrences",
JOURNAL = PRL,
VOLUME = "34",
YEAR = "2013",
NUMBER = "5",
MONTH = "April",
PAGES = "559-563",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256004"}
@article{bb261180,
AUTHOR = "Dou, H. and Baker, M.L. and Ju, T.",
TITLE = "Graph-based deformable matching of 3D line with application in protein
fitting",
JOURNAL = VC,
VOLUME = "31",
YEAR = "2015",
NUMBER = "6-8",
MONTH = "June",
PAGES = "967-977",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256005"}
@article{bb261181,
AUTHOR = "Ju, T. and Baker, M.L. and Dou, H.",
TITLE = "Graph-based deformable matching of 3D line with application in protein
fitting",
JOURNAL = VC,
VOLUME = "31",
YEAR = "2015",
NUMBER = "11",
MONTH = "November",
PAGES = "1567",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256005"}
@article{bb261182,
AUTHOR = "Mallek, S. and Boukhris, I. and Elouedi, Z.",
TITLE = "Community detection for graph-based similarity:
Application to protein binding pockets classification",
JOURNAL = PRL,
VOLUME = "62",
YEAR = "2015",
NUMBER = "1",
PAGES = "49-54",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256006"}
@article{bb261183,
AUTHOR = "Suryanto, C.H. and Fukui, K. and Hino, H.",
TITLE = "Protein Fold Classification Using Large Margin Combination of Distance
Metrics",
JOURNAL = IEICE,
VOLUME = "E99-D",
YEAR = "2016",
NUMBER = "3",
MONTH = "March",
PAGES = "714-723",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256007"}
@inproceedings{bb261184,
AUTHOR = "Suryanto, C.H. and Hino, H. and Fukui, K.",
TITLE = "Combination of Multiple Distance Measures for Protein Fold
Classification",
BOOKTITLE = ACPR13,
YEAR = "2013",
PAGES = "440-445",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256008"}
@article{bb261185,
AUTHOR = "Punjani, A. and Brubaker, M.A. and Fleet, D.J.",
TITLE = "Building Proteins in a Day: Efficient 3D Molecular Structure
Estimation with Electron Cryomicroscopy",
JOURNAL = PAMI,
VOLUME = "39",
YEAR = "2017",
NUMBER = "4",
MONTH = "April",
PAGES = "706-718",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256009"}
@inproceedings{bb261186,
AUTHOR = "Brubaker, M.A. and Punjani, A. and Fleet, D.J.",
TITLE = "Building proteins in a day: Efficient 3D molecular reconstruction",
BOOKTITLE = CVPR15,
YEAR = "2015",
PAGES = "3099-3108",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256010"}
@article{bb261187,
AUTHOR = "Sun, D. and Liang, H.D. and Ge, M.L. and Ding, Z.L. and Cai, W.T. and Luo, B.",
TITLE = "Protein functional annotation refinement based on graph regularized
l1-norm PCA",
JOURNAL = PRL,
VOLUME = "87",
YEAR = "2017",
NUMBER = "1",
PAGES = "212-221",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256011"}
@article{bb261188,
AUTHOR = "Barnett, A. and Greengard, L. and Pataki, A. and Spivak, M.",
TITLE = "Rapid Solution of the Cryo-EM Reconstruction Problem by Frequency
Marching",
JOURNAL = SIIMS,
VOLUME = "10",
YEAR = "2017",
NUMBER = "3",
PAGES = "1170-1195",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256012"}
@article{bb261189,
TITLE = "Europe's new X-ray laser delivers results: Scientists used the EuXFEL
to reveal the structures of the tiniest proteins",
JOURNAL = Spectrum,
VOLUME = "55",
YEAR = "2018",
NUMBER = "11",
MONTH = "November",
PAGES = "10-11",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256013"}
@article{bb261190,
AUTHOR = "Sit, A. and Shin, W.H. and Kihara, D.",
TITLE = "Three-dimensional Krawtchouk descriptors for protein local surface
shape comparison",
JOURNAL = PR,
VOLUME = "93",
YEAR = "2019",
PAGES = "534-545",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256014"}
@article{bb261191,
AUTHOR = "Mensi, A. and Bicego, M. and Lovato, P. and Loog, M. and Tax, D.M.J.",
TITLE = "A dissimilarity-based multiple instance learning approach for protein
remote homology detection",
JOURNAL = PRL,
VOLUME = "128",
YEAR = "2019",
PAGES = "231-236",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256015"}
@inproceedings{bb261192,
AUTHOR = "Mensi, A. and Bicego, M. and Lovato, P. and Loog, M. and Tax, D.M.J.",
TITLE = "Protein Remote Homology Detection Using Dissimilarity-Based Multiple
Instance Learning",
BOOKTITLE = SSSPR18,
YEAR = "2018",
PAGES = "119-129",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256016"}
@article{bb261193,
AUTHOR = "Vascon, S. and Frasca, M. and Tripodi, R. and Valentini, G. and Pelillo, M.",
TITLE = "Protein function prediction as a graph-transduction game",
JOURNAL = PRL,
VOLUME = "134",
YEAR = "2020",
PAGES = "96-105",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256017"}
@article{bb261194,
AUTHOR = "Pan, X.Y. and Shen, H.B.",
TITLE = "Scoring disease-microRNA associations by integrating disease
hierarchy into graph convolutional networks",
JOURNAL = PR,
VOLUME = "105",
YEAR = "2020",
PAGES = "107385",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256018"}
@article{bb261195,
AUTHOR = "Cheng, J.Y. and Liu, Y.H. and Ma, Y.M.",
TITLE = "Protein secondary structure prediction based on integration of CNN
and LSTM model",
JOURNAL = JVCIR,
VOLUME = "71",
YEAR = "2020",
PAGES = "102844",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256019"}
@article{bb261196,
AUTHOR = "Santander Jimenez, S. and Vega Rodriguez, M.A. and Sousa, L.",
TITLE = "Inter-Algorithm Multiobjective Cooperation for Phylogenetic
Reconstruction on Amino Acid Data",
JOURNAL = Cyber,
VOLUME = "52",
YEAR = "2022",
NUMBER = "5",
MONTH = "May",
PAGES = "3577-3591",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256020"}
@article{bb261197,
AUTHOR = "Elnaggar, A. and Heinzinger, M. and Dallago, C. and Rehawi, G. and Wang, Y. and Jones, L. and Gibbs, T. and Feher, T. and Angerer, C. and Steinegger, M. and Bhowmik, D. and Rost, B.",
TITLE = "ProtTrans: Toward Understanding the Language of Life Through
Self-Supervised Learning",
JOURNAL = PAMI,
VOLUME = "44",
YEAR = "2022",
NUMBER = "10",
MONTH = "October",
PAGES = "7112-7127",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256021"}
@article{bb261198,
AUTHOR = "Paquet, E. and Viktor, H.L. and Madi, K. and Wu, J.Z.",
TITLE = "Deformable Protein Shape Classification Based on Deep Learning, and
the Fractional Fokker-Planck and Kähler-Dirac Equations",
JOURNAL = PAMI,
VOLUME = "45",
YEAR = "2023",
NUMBER = "1",
MONTH = "January",
PAGES = "391-407",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256022"}
@article{bb261199,
AUTHOR = "Wang, Y.F. and Wang, X. and Chen, C. and Gao, H.L. and Salhi, A. and Gao, X. and Yu, B.",
TITLE = "RPI-CapsuleGAN: Predicting RNA-protein interactions through an
interpretable generative adversarial capsule network",
JOURNAL = PR,
VOLUME = "141",
YEAR = "2023",
PAGES = "109626",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851.html#TT256023"}
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