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AUTHOR = "Ben Haim, T. and Raviv, T.R.",
TITLE = "Graph Neural Network for Cell Tracking in Microscopy Videos",
BOOKTITLE = ECCV22,
YEAR = "2022",
PAGES = "XXI:610-626",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259916"}
@inproceedings{bb265101,
AUTHOR = "Harmanec, A. and Kadlecova, Z. and Sroubek, F.",
TITLE = "Novel Reconstruction With Inter-Frame Motion Compensation For Fast
Super-Resolution Live Cell Imaging",
BOOKTITLE = ICIP22,
YEAR = "2022",
PAGES = "3211-3215",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259917"}
@inproceedings{bb265102,
AUTHOR = "Hayashida, J. and Nishimura, K. and Bise, R.",
TITLE = "Consistent Cell Tracking in Multi-frames with Spatio-Temporal Context
by Object-Level Warping Loss",
BOOKTITLE = WACV22,
YEAR = "2022",
PAGES = "1759-1768",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259918"}
@inproceedings{bb265103,
AUTHOR = "Deng, X. and Sarkar, R. and Labruyere, E. and Olivo Marin, J.C. and Srivastava, A.",
TITLE = "Modeling Shape Dynamics During Cell Motility in Microscopy Videos",
BOOKTITLE = ICIP20,
YEAR = "2020",
PAGES = "2491-2495",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259919"}
@inproceedings{bb265104,
AUTHOR = "Nishimura, K. and Hayashida, J. and Wang, C.Y. and Ker, D.F.E. and Bise, R.",
TITLE = "Weakly-supervised Cell Tracking via Backward-and-forward Propagation",
BOOKTITLE = ECCV20,
YEAR = "2020",
PAGES = "XII: 104-121",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259920"}
@inproceedings{bb265105,
AUTHOR = "Hayashida, J. and Nishimura, K. and Bise, R.",
TITLE = "MPM: Joint Representation of Motion and Position Map for Cell
Tracking",
BOOKTITLE = CVPR20,
YEAR = "2020",
PAGES = "3822-3831",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259921"}
@inproceedings{bb265106,
AUTHOR = "Anjum, S. and Gurari, D.",
TITLE = "CTMC: Cell Tracking with Mitosis Detection Dataset Challenge",
BOOKTITLE = Microscopy20,
YEAR = "2020",
PAGES = "4228-4237",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259922"}
@inproceedings{bb265107,
AUTHOR = "Almakady, Y. and Mahmoodi, S.",
TITLE = "Texture-Based Region Tracking Using Gaussian Markov Random Fields for
Cilia Motion Analysis",
BOOKTITLE = ICIP19,
YEAR = "2019",
PAGES = "1292-1296",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259923"}
@inproceedings{bb265108,
AUTHOR = "Ram, S. and Majdi, M.S. and Rodriguez, J.J. and Gao, Y. and Brooks, H.L.",
TITLE = "Classification of Primary Cilia in Microscopy Images Using
Convolutional Neural Random Forests",
BOOKTITLE = Southwest18,
YEAR = "2018",
PAGES = "89-92",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259924"}
@inproceedings{bb265109,
AUTHOR = "Dewan, K. and Dastidar, T.R. and Ahmad, M.",
TITLE = "Estimation of Sperm Concentration and Total Motility from Microscopic
Videos of Human Semen Samples",
BOOKTITLE = Microscopy18,
YEAR = "2018",
PAGES = "2380-23807",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259925"}
@inproceedings{bb265110,
AUTHOR = "Shaker, F. and Monadjemi, S.A. and Alirezaie, J.",
TITLE = "Classification of human sperm heads using elliptic features and LDA",
BOOKTITLE = IPRIA17,
YEAR = "2017",
PAGES = "151-155",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259926"}
@inproceedings{bb265111,
AUTHOR = "Rempfler, M. and Lange, J.H. and Jug, F. and Blasse, C. and Myers, E.W. and Menze, B.H. and Andres, B.",
TITLE = "Efficient Algorithms for Moral Lineage Tracing",
BOOKTITLE = ICCV17,
YEAR = "2017",
PAGES = "4705-4714",
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@inproceedings{bb265112,
AUTHOR = "Maska, M. and Matula, P.",
TITLE = "Particle Tracking Accuracy Measurement Based on Comparison of Linear
Oriented Forests",
BOOKTITLE = BioIm17,
YEAR = "2017",
PAGES = "11-17",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259928"}
@inproceedings{bb265113,
AUTHOR = "Fortun, D. and Debroux, N. and Kervrann, C.",
TITLE = "Spatially-Variant Kernel for Optical Flow Under Low Signal-to-Noise
Ratios Application to Microscopy",
BOOKTITLE = BioIm17,
YEAR = "2017",
PAGES = "42-48",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259929"}
@inproceedings{bb265114,
AUTHOR = "Selka, F. and Blein, T. and Burguet, J. and Biot, E. and Laufs, P. and Andrey, P.",
TITLE = "Towards a Spatio-Temporal Atlas of 3D Cellular Parameters During Leaf
Morphogenesis",
BOOKTITLE = BioIm17,
YEAR = "2017",
PAGES = "56-63",
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@inproceedings{bb265115,
AUTHOR = "Lai, Y. and Kamata, S.i. and Fu, Z.",
TITLE = "Robust registration of serial cell microscopic images using 3D
Hilbert scan search",
BOOKTITLE = MVA17,
YEAR = "2017",
PAGES = "530-533",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259931"}
@inproceedings{bb265116,
AUTHOR = "Jug, F. and Levinkov, E. and Blasse, C. and Myers, E.W. and Andres, B.",
TITLE = "Moral Lineage Tracing",
BOOKTITLE = CVPR16,
YEAR = "2016",
PAGES = "5926-5935",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259932"}
@inproceedings{bb265117,
AUTHOR = "Matuszewski, D.J. and Sintorn, I.M. and Puigvert, J.C. and Wahlby, C.",
TITLE = "Comparison of Flow Cytometry and Image-Based Screening for Cell Cycle
Analysis",
BOOKTITLE = ICIAR16,
YEAR = "2016",
PAGES = "623-630",
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@inproceedings{bb265118,
AUTHOR = "Medina Rodriguez, R. and Guzman Masias, L. and Alatrista Salas, H. and Beltran Castanon, C.",
TITLE = "Sperm Cells Segmentation in Micrographic Images Through Lambertian
Reflectance Model",
BOOKTITLE = CAIP15,
YEAR = "2015",
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AUTHOR = "Cheng, J.R. and Xiong, W. and Gu, Y. and Chia, S.C. and Wang, Y. and Lim, J.H.",
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Cell Segmentation and Tracking",
BOOKTITLE = ACCV14,
YEAR = "2014",
PAGES = "III: 268-283",
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@inproceedings{bb265120,
AUTHOR = "Ramesh, N. and Tasdizen, T.",
TITLE = "Cell tracking using particle filters with implicit convex shape model
in 4D confocal microscopy images",
BOOKTITLE = ICIP14,
YEAR = "2014",
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@inproceedings{bb265121,
AUTHOR = "Chakraborty, A. and Roy Chowdhury, A.K.",
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structures",
BOOKTITLE = ICIP14,
YEAR = "2014",
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@inproceedings{bb265122,
AUTHOR = "Saha, B.N. and Ray, N. and McArdle, S. and Ley, K.",
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for 2D deformable registration of time sequenced images",
BOOKTITLE = ICIP17,
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@inproceedings{bb265123,
AUTHOR = "McArdle, S. and Acton, S.T. and Ley, K. and Ray, N.",
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using dynamic programming and minimum spanning trees",
BOOKTITLE = ICIP14,
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@inproceedings{bb265124,
AUTHOR = "Esteves, T. and Carvalho, A. and Monteiro, F.J. and Quelhas, P.",
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BOOKTITLE = ICIAR14,
YEAR = "2014",
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BOOKTITLE = DICTA13,
YEAR = "2013",
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YEAR = "2012",
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AUTHOR = "Wang, Q. and Ou, Y. and Julius, A.A. and Boyer, K.L. and Kim, M.J.",
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BOOKTITLE = ICPR12,
YEAR = "2012",
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@inproceedings{bb265128,
AUTHOR = "Chowdhury, A.S. and Paul, A. and Bunyak, F. and Cornelison, D.D.W. and Palaniappan, K.",
TITLE = "Semi-automated tracking of muscle satellite cells in brightfield
microscopy video",
BOOKTITLE = ICIP12,
YEAR = "2012",
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@inproceedings{bb265129,
AUTHOR = "Saha, U. and Singh, R.",
TITLE = "Vision-based Tracking of Complex Macroparasites for High-content
Phenotypic Drug Screening",
BOOKTITLE = ISVC12,
YEAR = "2012",
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@inproceedings{bb265130,
AUTHOR = "Garcia Olalla, O. and Alegre, E. and Fernandez Robles, L. and Garcia Ordas, M.T.",
TITLE = "Vitality Assessment of Boar Sperm Using an Adaptive LBP Based on
Oriented Deviation",
BOOKTITLE = CVLBP12,
YEAR = "2012",
PAGES = "I:61-72",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259946"}
@inproceedings{bb265131,
AUTHOR = "Gonzalez Castro, V. and Alegre, E. and Garcia Olalla, O. and Garcia Ordas, D. and Garcia Ordas, M.T. and Fernandez Robles, L.",
TITLE = "Curvelet-Based Texture Description to Classify Intact and Damaged Boar
Spermatozoa",
BOOKTITLE = ICIAR12,
YEAR = "2012",
PAGES = "II: 448-455",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259947"}
@inproceedings{bb265132,
AUTHOR = "Mkrtchyan, K. and Singh, D. and Liu, M. and Reddy, V. and Roy Chowdhury, A. and Gopi, M.",
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YEAR = "2011",
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@inproceedings{bb265133,
AUTHOR = "Chowdhury, A.S. and Chatterjee, R. and Ghosh, M. and Ray, N.",
TITLE = "Cell Tracking in Video Microscopy Using Bipartite Graph Matching",
BOOKTITLE = ICPR10,
YEAR = "2010",
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@inproceedings{bb265134,
AUTHOR = "Iwanowski, M. and Korzynska, A.",
TITLE = "Segmentation of Moving Cells in Bright Field and Epi-Fluorescent
Microscopic Image Sequences",
BOOKTITLE = ICCVG10,
YEAR = "2010",
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@inproceedings{bb265135,
AUTHOR = "Ong, L.L.S. and Ang, M.H. and Asada, H.H.",
TITLE = "Tracking of cell population from time lapse and end point confocal
microscopy images with multiple hypothesis Kalman smoothing filters",
BOOKTITLE = MMBIA10,
YEAR = "2010",
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@inproceedings{bb265136,
AUTHOR = "Thirusittampalam, K. and Hossain, M.J. and Ghita, O. and Whelan, P.F.",
TITLE = "A Novel Framework for Tracking In-vitro Cells in Time-lapse Phase
Contrast Data",
BOOKTITLE = BMVC10,
YEAR = "2010",
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BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT259952"}
@inproceedings{bb265137,
AUTHOR = "Thirusittampalam, K. and Hossain, M.J. and Ghita, O. and Whelan, P.F.",
TITLE = "Cellular Tracking in Time-Lapse Phase Contrast Images",
BOOKTITLE = IMVIP09,
YEAR = "2009",
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@inproceedings{bb265138,
AUTHOR = "Mohamed, R. and El Baz, A. and Navalta, J.",
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morphological image processing",
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AUTHOR = "Quelhas, P. and Mendonca, A.M. and Campilho, A.",
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Detection",
BOOKTITLE = ICIAR10,
YEAR = "2010",
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AUTHOR = "Marcuzzo, M. and Guichard, T. and Quelhas, P. and Mendonca, A.M. and Campilho, A.",
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YEAR = "2009",
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AUTHOR = "Marcuzzo, M. and Quelhas, P. and Campilho, A. and Mendonca, A.M. and Campilho, A.",
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BOOKTITLE = ICIAR08,
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AUTHOR = "Marcuzzo, M. and Quelhas, P. and Mendonca, A.M. and Campilho, A.",
TITLE = "Tracking of Arabidopsis thaliana root cells in time-lapse microscopy",
BOOKTITLE = ICPR08,
YEAR = "2008",
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AUTHOR = "Sanchez, L. and Gonzalez, V. and Alegre, E. and Alaiz, R.",
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Samples with Uncertain Damaged/Intact Cell Proportions",
BOOKTITLE = ICIAR08,
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AUTHOR = "Garcia, B. and Campilho, A. and Scheres, B. and Campilho, A.",
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Phase-Contrast Microscopy",
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of Dendritic Spines in Time-Lapse Confocal Microscopy",
JOURNAL = MedImg,
VOLUME = "30",
YEAR = "2011",
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MONTH = "March",
PAGES = "632-641",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259978"}
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AUTHOR = "Salimi Khorshidi, G. and Nichols, T.E. and Smith, S.M. and Woolrich, M.W.",
TITLE = "Using Gaussian-Process Regression for Meta-Analytic Neuroimaging
Inference Based on Sparse Observations",
JOURNAL = MedImg,
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YEAR = "2011",
NUMBER = "7",
MONTH = "July",
PAGES = "1401-1416",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259979"}
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AUTHOR = "Akselrod Ballin, A. and Bock, D. and Reid, R.C. and Warfield, S.K.",
TITLE = "Accelerating Image Registration With the Johnson-Lindenstrauss Lemma:
Application to Imaging 3-D Neural Ultrastructure With Electron
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JOURNAL = MedImg,
VOLUME = "30",
YEAR = "2011",
NUMBER = "7",
MONTH = "July",
PAGES = "1427-1438",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259980"}
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AUTHOR = "Li, Q. and Deng, Z.",
TITLE = "A Surface-Based 3-D Dendritic Spine Detection Approach From Confocal
Microscopy Images",
JOURNAL = IP,
VOLUME = "21",
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MONTH = "March",
PAGES = "1223-1230",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259981"}
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AUTHOR = "Pereira, F. and Botvinick, M. and Detre, G.",
TITLE = "Using Wikipedia to learn semantic feature representations of concrete
concepts in neuroimaging experiments",
JOURNAL = AI,
VOLUME = "194",
YEAR = "2013",
NUMBER = "1",
MONTH = "January",
PAGES = "240-252",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259982"}
@article{bb265167,
AUTHOR = "Zhang, M. and Sakaie, K.E. and Jones, S.E.",
TITLE = "Logical Foundations and Fast Implementation of Probabilistic
Tractography",
JOURNAL = MedImg,
VOLUME = "32",
YEAR = "2013",
NUMBER = "8",
PAGES = "1397-1410",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259983"}
@inproceedings{bb265168,
AUTHOR = "Zhang, M. and Sakaie, K.E. and Jones, S.E.",
TITLE = "Toward whole-brain maps of neural connections:
Logical framework and fast implementation",
BOOKTITLE = MMBIA12,
YEAR = "2012",
PAGES = "193-197",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259984"}
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AUTHOR = "Becker, C. and Ali, K. and Knott, G. and Fua, P.",
TITLE = "Learning Context Cues for Synapse Segmentation",
JOURNAL = MedImg,
VOLUME = "32",
YEAR = "2013",
NUMBER = "10",
PAGES = "1864-1877",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259985"}
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AUTHOR = "Trapp, M. and Schulze, F. and Buhler, K. and Liu, T. and Dickson, B.J.",
TITLE = "3D object retrieval in an atlas of neuronal structures",
JOURNAL = VC,
VOLUME = "29",
YEAR = "2013",
NUMBER = "12",
MONTH = "December",
PAGES = "1363-1373",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259986"}
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AUTHOR = "Juan, E.J. and Gonzalez, R. and Albors, G. and Ward, M.P. and Irazoqui, P.",
TITLE = "Vagus nerve modulation using focused pulsed ultrasound:
Potential applications and preliminary observations in a rat",
JOURNAL = IJIST,
VOLUME = "24",
YEAR = "2014",
NUMBER = "1",
PAGES = "67-71",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259987"}
@article{bb265172,
AUTHOR = "Jagadeesh, V. and Anderson, J. and Jones, B. and Marc, R. and Fisher, S. and Manjunath, B.S.",
TITLE = "Synapse classification and localization in Electron Micrographs",
JOURNAL = PRL,
VOLUME = "43",
YEAR = "2014",
NUMBER = "1",
PAGES = "17-24",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259988"}
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AUTHOR = "Mukherjee, S. and Condron, B. and Acton, S.T.",
TITLE = "Tubularity Flow Field: A Technique for Automatic Neuron Segmentation",
JOURNAL = IP,
VOLUME = "24",
YEAR = "2015",
NUMBER = "1",
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PAGES = "374-389",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259989"}
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AUTHOR = "Weng, D. and Wang, Y. and Gong, M. and Tao, D. and Wei, H. and Huang, D.",
TITLE = "DERF: Distinctive Efficient Robust Features From the Biological
Modeling of the P Ganglion Cells",
JOURNAL = IP,
VOLUME = "24",
YEAR = "2015",
NUMBER = "8",
MONTH = "August",
PAGES = "2287-2302",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259990"}
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AUTHOR = "Mata, G. and Morales, M. and Romero, A. and Rubio, J.",
TITLE = "Zigzag persistent homology for processing neuronal images",
JOURNAL = PRL,
VOLUME = "62",
YEAR = "2015",
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BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259991"}
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AUTHOR = "Wu, Y.J. and Liu, B.Y.",
TITLE = "Spatial and Anatomical Regularization Based on Multiple Kernel Learning
for Neuroimaging Classification",
JOURNAL = IEICE,
VOLUME = "E99-D",
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MONTH = "April",
PAGES = "1272-1274",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259992"}
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AUTHOR = "Wu, Y.J. and Liu, B.Y.",
TITLE = "Tensorial Kernel Based on Spatial Structure Information for
Neuroimaging Classification",
JOURNAL = IEICE,
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PAGES = "1380-1383",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259993"}
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AUTHOR = "Basu, S. and Ooi, W.T. and Racoceanu, D.",
TITLE = "Neurite Tracing With Object Process",
JOURNAL = MedImg,
VOLUME = "35",
YEAR = "2016",
NUMBER = "6",
MONTH = "June",
PAGES = "1443-1451",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259994"}
@inproceedings{bb265179,
AUTHOR = "Basu, S. and Racoceanu, D.",
TITLE = "Reconstructing neuronal morphology from microscopy stacks using fast
marching",
BOOKTITLE = ICIP14,
YEAR = "2014",
PAGES = "3597-3601",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259995"}
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AUTHOR = "Li, Z.Y. and Fang, R. and Shen, F.M. and Katouzian, A. and Zhang, S.T.",
TITLE = "Indexing and mining large-scale neuron databases using maximum inner
product search",
JOURNAL = PR,
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AUTHOR = "He, X.X. and Lum, A. and Sharma, M. and Brahm, G. and Mercado, A. and Li, S.",
TITLE = "Automated segmentation and area estimation of neural foramina with
boundary regression model",
JOURNAL = PR,
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AUTHOR = "Gu, L. and Zhang, X.W. and Zhao, H. and Li, H.Q. and Cheng, L.",
TITLE = "Segment 2D and 3D Filaments by Learning Structured and Contextual
Features",
JOURNAL = MedImg,
VOLUME = "36",
YEAR = "2017",
NUMBER = "2",
MONTH = "February",
PAGES = "596-606",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259998"}
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AUTHOR = "Li, R.J. and Zeng, T. and Peng, H.C. and Ji, S.W.",
TITLE = "Deep Learning Segmentation of Optical Microscopy Images Improves 3-D
Neuron Reconstruction",
JOURNAL = MedImg,
VOLUME = "36",
YEAR = "2017",
NUMBER = "7",
MONTH = "July",
PAGES = "1533-1541",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT259999"}
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AUTHOR = "Liu, M. and Gong, R. and Chen, W. and Peng, H.C.",
TITLE = "3D neuron tip detection in volumetric microscopy images using an
adaptive ray-shooting model",
JOURNAL = PR,
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YEAR = "2018",
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BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260000"}
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AUTHOR = "Krasowski, N.E. and Beier, T. and Knott, G.W. and Kothe, U. and Hamprecht, F.A. and Kreshuk, A.",
TITLE = "Neuron Segmentation With High-Level Biological Priors",
JOURNAL = MedImg,
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YEAR = "2018",
NUMBER = "4",
MONTH = "April",
PAGES = "829-839",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260001"}
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AUTHOR = "Hilt, P. and Zarvandi, M. and Kaziakhmedov, E. and Bhide, S. and Laptin, M. and Pape, C. and Kreshuk, A.",
TITLE = "Reinforcement learning for instance segmentation with high-level
priors",
BOOKTITLE = BioIm23,
YEAR = "2023",
PAGES = "3915-3924",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260002"}
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AUTHOR = "Liu, S. and Zhang, D. and Song, Y. and Peng, H. and Cai, W.",
TITLE = "Automated 3-D Neuron Tracing With Precise Branch Erasing and
Confidence Controlled Back Tracking",
JOURNAL = MedImg,
VOLUME = "37",
YEAR = "2018",
NUMBER = "11",
MONTH = "November",
PAGES = "2441-2452",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260003"}
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AUTHOR = "Skibbe, H. and Reisert, M. and Nakae, K. and Watakabe, A. and Hata, J. and Mizukami, H. and Okano, H. and Yamamori, T. and Ishii, S.",
TITLE = "PAT: Probabilistic Axon Tracking for Densely Labeled Neurons in Large
3-D Micrographs",
JOURNAL = MedImg,
VOLUME = "38",
YEAR = "2019",
NUMBER = "1",
MONTH = "January",
PAGES = "69-78",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260004"}
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AUTHOR = "Funke, J. and Tschopp, F. and Grisaitis, W. and Sheridan, A. and Singh, C. and Saalfeld, S. and Turaga, S.C.",
TITLE = "Large Scale Image Segmentation with Structured Loss Based Deep
Learning for Connectome Reconstruction",
JOURNAL = PAMI,
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YEAR = "2019",
NUMBER = "7",
MONTH = "July",
PAGES = "1669-1680",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260005"}
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AUTHOR = "Gorriz, J.M. and Ramirez, J. and Suckling, J.",
TITLE = "On the computation of distribution-free performance bounds:
Application to small sample sizes in neuroimaging",
JOURNAL = PR,
VOLUME = "93",
YEAR = "2019",
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BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260006"}
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AUTHOR = "Tang, R. and Ketcha, M. and Badea, A. and Calabrese, E.D. and Margulies, D.S. and Vogelstein, J.T. and Priebe, C.E. and Sussman, D.L.",
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JOURNAL = MedImg,
VOLUME = "38",
YEAR = "2019",
NUMBER = "6",
MONTH = "June",
PAGES = "1446-1456",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260007"}
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AUTHOR = "Yi, J.R. and Wu, P.X. and Metaxas, D.N.",
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JOURNAL = CVIU,
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BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260008"}
@inproceedings{bb265193,
AUTHOR = "Yi, J.R. and Wu, P.X. and Jiang, M.L. and Hoeppner, D.J. and Metaxas, D.N.",
TITLE = "Instance Segmentation of Neural Cells",
BOOKTITLE = BioIm18,
YEAR = "2018",
PAGES = "VI:395-402",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260009"}
@article{bb265194,
AUTHOR = "Li, Q. and Shen, L.",
TITLE = "3D Neuron Reconstruction in Tangled Neuronal Image With Deep Networks",
JOURNAL = MedImg,
VOLUME = "39",
YEAR = "2020",
NUMBER = "2",
MONTH = "February",
PAGES = "425-435",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260010"}
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AUTHOR = "Zhao, J. and Chen, X.J. and Xiong, Z.W. and Liu, D. and Zeng, J.J. and Xie, C.Y. and Zhang, Y.Y. and Zha, Z.J. and Bi, G.Q. and Wu, F.",
TITLE = "Neuronal Population Reconstruction From Ultra-Scale Optical
Microscopy Images via Progressive Learning",
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YEAR = "2020",
NUMBER = "12",
MONTH = "December",
PAGES = "4034-4046",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260011"}
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AUTHOR = "Chen, X.J. and Zhang, C. and Zhao, J. and Xiong, Z.W. and Zha, Z.J. and Wu, F.",
TITLE = "Weakly Supervised Neuron Reconstruction From Optical Microscopy
Images With Morphological Priors",
JOURNAL = MedImg,
VOLUME = "40",
YEAR = "2021",
NUMBER = "11",
MONTH = "November",
PAGES = "3205-3216",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260012"}
@article{bb265197,
AUTHOR = "Jiang, Y. and Chen, W. and Liu, M. and Wang, Y. and Meijering, E.",
TITLE = "3D Neuron Microscopy Image Segmentation via the Ray-Shooting Model
and a DC-BLSTM Network",
JOURNAL = MedImg,
VOLUME = "40",
YEAR = "2021",
NUMBER = "1",
MONTH = "January",
PAGES = "26-37",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260013"}
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AUTHOR = "Chen, W. and Liu, M. and Zhan, Q. and Tan, Y. and Meijering, E. and Radojevic, M. and Wang, Y.",
TITLE = "Spherical-Patches Extraction for Deep-Learning-Based Critical Points
Detection in 3D Neuron Microscopy Images",
JOURNAL = MedImg,
VOLUME = "40",
YEAR = "2021",
NUMBER = "2",
MONTH = "February",
PAGES = "527-538",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260014"}
@article{bb265199,
AUTHOR = "Lee, K. and Lu, R. and Luther, K. and Seung, H.S.",
TITLE = "Learning and Segmenting Dense Voxel Embeddings for 3D Neuron
Reconstruction",
JOURNAL = MedImg,
VOLUME = "40",
YEAR = "2021",
NUMBER = "12",
MONTH = "December",
PAGES = "3801-3811",
BIBSOURCE = "http://www.visionbib.com/bibliography/medical851neu1.html#TT260015"}
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